STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW52992.1Base excision DNA repair protein, HhH-GPD family; COG: COG2231; Pfam: PF00730; InterPro: IPR003265. (214 aa)    
Predicted Functional Partners:
EEW52991.1
Hypothetical protein; COG: COG4814; Pfam: PF06028; InterPro: IPR010315.
       0.765
EEW52993.1
HD domain protein; COG: COG1418; Pfam: PF01966.
  
    0.578
EEW52990.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
       0.501
EEW54124.1
Cation diffusion facilitator family transporter; COG: COG1230; Pfam: PF01545; InterPro: IPR002524.
 
      0.446
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.