STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53022.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
dnaD
DnaD domain protein; Pfam: PF04271; InterPro: IPR006343.
 
     0.849
dinG
Putative DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
 
    0.816
EEW53349.1
Hypothetical protein.
  
     0.677
EEW53706.1
Putative rod shape-determining protein MreD.
  
     0.657
EEW54488.1
Hypothetical protein; Pfam: PF06570; InterPro: IPR009214.
  
     0.649
EEW54407.1
YycH protein; Pfam: PF07435; InterPro: IPR009996.
  
     0.648
EEW53517.1
Hypothetical protein.
  
     0.610
mvk
Mevalonate kinase; COG: COG1577; Pfam: PF00288,PF08544; InterPro: IPR006205.
       0.606
mvaD
Diphosphomevalonate decarboxylase; COG: COG3407; Pfam: PF00288,PF08544; InterPro: IPR005935.
       0.601
mvaK
Phosphomevalonate kinase; COG: COG1577; Pfam: PF00288,PF08544; InterPro: IPR005917.
 
     0.594
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.