STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53076.1DnaD domain protein. (310 aa)    
Predicted Functional Partners:
EEW53077.1
Hypothetical protein; Pfam: PF06147; InterPro: IPR010373.
 
     0.916
EEW53078.1
Hypothetical protein.
       0.773
EEW53213.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF04650,PF08363,PF06458,PF00746; InterPro: IPR009459.
  
     0.772
EEW54153.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF06458,PF00746; InterPro: IPR009459.
  
     0.770
EEW53594.1
KxYKxGKxW signal domain protein; Pfam: PF00746.
 
     0.766
EEW52707.1
Hypothetical protein.
  
     0.756
EEW53099.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
  
     0.750
EEW54529.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF08428,PF00746; InterPro: IPR012706.
  
     0.737
EEW54698.1
YeeE/YedE family protein.
  
     0.732
EEW53072.1
Hypothetical protein.
       0.732
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.