STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW52845.1Hypothetical protein; COG: COG2730; InterPro: IPR013781; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (388 aa)    
Predicted Functional Partners:
EEW52844.1
Glycosyl hydrolase family 3 N-terminal domain protein; COG: COG1472; Pfam: PF00933,PF01915; InterPro: IPR002772; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.969
EEW52846.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
 
   
 0.840
EEW52847.1
Beta-galactosidase trimerization domain protein; Pfam: PF02449,PF08532,PF08533; InterPro: IPR013781.
 
   
 0.772
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
     
 0.708
EEW52842.1
Glycosyl hydrolase, family 31; COG: COG1501; Pfam: PF01055; InterPro: IPR000322; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.590
EEW52848.1
Transcriptional regulator, AraC family; Pfam: PF02311,PF00165; InterPro: IPR000005.
 
   
 0.571
agl
Glycosyl hydrolase, family 31; COG: COG1501; Pfam: PF01055; InterPro: IPR000322; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.546
xynA
Glycosyl hydrolase, family 43; COG: COG3507; Pfam: PF04616; InterPro: IPR006710; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.500
yicI
Glycosyl hydrolase, family 31; COG: COG1501; Pfam: PF01055; InterPro: IPR000322; Belongs to the glycosyl hydrolase 31 family.
    
  0.484
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.