STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW52650.1Peptidase, M23 family; Pfam: PF01551. (869 aa)    
Predicted Functional Partners:
EEW52724.1
Hypothetical protein.
 
    0.776
EEW54070.1
Antibiotic biosynthesis monooxygenase; Pfam: PF03992.
  
     0.747
EEW52661.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; COG: COG1705; Pfam: PF01832; InterPro: IPR013338.
 
 
0.687
EEW54310.1
Addiction module antitoxin, RelB/DinJ family; Pfam: PF04221; InterPro: IPR007337.
  
     0.680
EEW54053.1
Hypothetical protein.
  
     0.664
EEW52660.1
NlpC/P60 family protein; Pfam: PF00877.
 
  
0.646
cps2F
Glycosyltransferase, group 2 family protein; COG: COG0463; Pfam: PF00535; InterPro: IPR001173.
 
   
 0.637
EEW52841.1
Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005.
  
     0.590
EEW53594.1
KxYKxGKxW signal domain protein; Pfam: PF00746.
 
     0.577
EEW54153.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF06458,PF00746; InterPro: IPR009459.
  
     0.553
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.