STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrCThreonine synthase; COG: COG0498; Pfam: PF00291; InterPro: IPR004450. (502 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; COG: COG0083; Pfam: PF00288,PF08544; InterPro: IPR000870.
 
 0.999
thrB-2
Homoserine kinase; COG: COG0083; Pfam: PF00288,PF08544; InterPro: IPR000870.
 
 0.998
hom
Homoserine dehydrogenase; COG: COG0460; Pfam: PF03447,PF00742; InterPro: IPR001342.
 
 0.990
ilvA
C-terminal regulatory domain of Threonine dehydratase; COG: COG1171; Pfam: PF00291,PF00585; InterPro: IPR001926.
  
 
 0.956
serC
Phosphoserine transaminase; COG: COG1932; Pfam: PF00266; InterPro: IPR003248.
   
 0.933
EEI20901.1
ACT domain protein; COG: COG4492; Pfam: PF01842.
 
  
  0.914
yclM
Amino acid kinase family; COG: COG0527; Pfam: PF00696; InterPro: IPR001341.
 
 
 0.902
leuD
3-isopropylmalate dehydratase, small subunit; COG: COG0066; Pfam: PF00694; InterPro: IPR004431.
  
  
 0.820
gltA
Class II glutamine amidotransferase; COG: COG0069; Pfam: PF00310,PF04898,PF01645,PF01493; InterPro: IPR013785.
  
  
 0.778
EEI19384.1
Amino acid kinase family; COG: COG0527; Pfam: PF00696; InterPro: IPR001341.
  
 
 0.745
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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