STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; COG: COG0554; Pfam: PF00370,PF02782; InterPro: IPR005999. (504 aa)    
Predicted Functional Partners:
pts1BCA
Phosphotransferase system, EIIC; COG: COG1263; Pfam: PF02378; InterPro: IPR003352.
  
 
 0.890
plsY
Acyl-phosphate glycerol 3-phosphate acyltransferase; COG: COG0344; Pfam: PF02660; InterPro: IPR003811.
     
 0.868
EEI20044.1
MIP family channel protein; COG: COG0580; Pfam: PF00230; InterPro: IPR000425.
 
 
 0.864
EEI20965.1
Trypsin; COG: COG0265; Pfam: PF00089,PF00595; InterPro: IPR001254.
    
 0.842
EEI18398.1
Hypothetical protein.
    
 0.842
EEI18818.1
Hydrolase, alpha/beta domain protein; COG: COG2267.
 
  
 0.787
gph
Glycoside/pentoside/hexuronide transporter; Pfam: PF00358; InterPro: IPR001927.
   
 
 0.781
gldA
Alcohol dehydrogenase, iron-dependent; COG: COG0371; Pfam: PF00465; InterPro: IPR001670.
     
 0.766
EEI19476.1
Alcohol dehydrogenase, iron-dependent; COG: COG0371; Pfam: PF00465.
     
 0.766
EEI19477.1
Hypothetical protein.
     
 0.766
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.