STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI19379.1FAH family protein; COG: COG0179; Pfam: PF01557; InterPro: IPR011234. (283 aa)    
Predicted Functional Partners:
EEI20198.1
FMN-binding domain protein; Pfam: PF04205,PF07992; InterPro: IPR007329.
  
 
  0.882
EEI20199.1
Hypothetical protein.
  
 
  0.882
EEI20200.1
Flavin reductase; COG: COG0431; Pfam: PF03358; InterPro: IPR005025.
  
 
  0.882
EEI19042.1
Hydratase/decarboxylase; COG: COG3971; Pfam: PF01689; InterPro: IPR011234.
  
 
 0.716
EEI19831.1
Glutamate-cysteine ligase; COG: COG2918; Pfam: PF04262; InterPro: IPR007370.
  
    0.697
fumC
Fumarate hydratase; COG: COG0114; Pfam: PF00206; InterPro: IPR000362.
   
 0.666
EEI19380.1
DEAD2 domain protein; COG: COG1199; Pfam: PF06733; InterPro: IPR006555.
  
  
 0.642
loxD
Putative glycolate oxidase, subunit GlcD; COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004113.
    
 0.637
EEI21099.1
COG: COG1053; Pfam: PF00890; InterPro: IPR010960.
  
 
  0.627
agxt
Aminotransferase, class V; COG: COG0075; Pfam: PF00266; InterPro: IPR015421.
   
 
  0.601
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.