STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coaAPantothenate kinase; COG: COG1072; Pfam: PF00485; InterPro: IPR004566. (307 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; COG: COG0669; Pfam: PF01467; InterPro: IPR014729.
     
 0.915
coaBC
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; COG: COG0452; Pfam: PF02441,PF04127; InterPro: IPR005252.
   
 
 0.910
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; COG: COG0519; Pfam: PF00117,PF03054,PF00958; InterPro: IPR001674.
       0.814
pyrF
Orotidine 5'-phosphate decarboxylase; COG: COG0284; Pfam: PF00215; InterPro: IPR013785.
    
  0.597
pdp
Pyrimidine-nucleoside phosphorylase; COG: COG0213; Pfam: PF02885,PF00591,PF07831; InterPro: IPR000053.
    
  0.590
EEI19300.1
Hypothetical protein; COG: COG3973; InterPro: IPR000212.
       0.550
fhs
Formate--tetrahydrofolate ligase; COG: COG2759; Pfam: PF01268; InterPro: IPR000559.
      
 0.520
birA
biotin--[acetyl-CoA-carboxylase] ligase; COG: COG0340; Pfam: PF08279,PF03099,PF02237; InterPro: IPR004408.
  
  
 0.510
EEI19299.1
Phosphoglycerate mutase family protein; COG: COG0406; Pfam: PF00300; InterPro: IPR013078.
 
     0.436
dut-3
dUTP diphosphatase; COG: COG0756; Pfam: PF00692; InterPro: IPR008180.
  
  
  0.414
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.