Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEI19315.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
EEI19321.1
Hypothetical protein; COG: COG1917.
 
     0.668
EEI19314.1
Transcriptional regulator, MerR family; Pfam: PF00376.
       0.628
EEI21132.1
Rhodanese-like protein; COG: COG0446; Pfam: PF00581; InterPro: IPR001763.
     
  0.519
EEI21133.1
Hypothetical protein; COG: COG0446.
     
  0.519
EEI21134.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446; Pfam: PF07992,PF00070; InterPro: IPR013027.
     
  0.519
cdr
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446; Pfam: PF07992,PF00070,PF02852; InterPro: IPR013027.
     
  0.519
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; COG: COG2230; Pfam: PF02353; InterPro: IPR003333.
       0.504
EEI19322.1
Hypothetical protein; Pfam: PF02627.
 
     0.472
EEI19313.1
Drug resistance MFS transporter, drug:H+ antiporter-2 family; COG: COG0477; Pfam: PF07690; InterPro: IPR004638.
  
    0.446
EEI19312.1
Hypothetical protein.
       0.445
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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