STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI19079.1Hypothetical protein; COG: COG1404; Pfam: PF00082,PF06280; InterPro: IPR015500. (746 aa)    
Predicted Functional Partners:
EEI19080.1
Hypothetical protein.
     0.986
EEI20213.1
MucBP domain protein; Pfam: PF07523,PF06458; InterPro: IPR009459.
   
 0.690
EEI19561.1
Hypothetical protein.
   
 0.690
EEI19354.1
MucBP domain protein; Pfam: PF06458; InterPro: IPR009459.
   
 0.690
EEI19328.1
Hypothetical protein.
   
 0.690
EEI18835.1
Hypothetical protein.
   
 0.690
cypC
Cytochrome P450 152A1; COG: COG2124; InterPro: IPR001128.
   
 0.684
secY
Preprotein translocase, SecY subunit; COG: COG0201; Pfam: PF00344; InterPro: IPR002208.
    
 
 0.627
napA2
TrkA C-terminal domain protein; Pfam: PF00999,PF02080; InterPro: IPR006153.
  
    0.550
EEI20916.1
PAP2 family protein; COG: COG1404; Pfam: PF01569; InterPro: IPR016118.
  
 
  0.498
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.