STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI18414.1CAAX amino terminal protease family protein; Pfam: PF02517,PF05513; InterPro: IPR003675. (235 aa)    
Predicted Functional Partners:
EEI18415.1
Pro-kumamolisin, activation domain protein; COG: COG4934; Pfam: PF09286; InterPro: IPR000209.
       0.732
EEI18412.1
Hypothetical protein; Pfam: PF03412.
       0.714
EEI18413.1
Peptidase family T4; COG: COG3191; Pfam: PF03576; InterPro: IPR005321.
       0.714
EEI18416.1
Hypothetical protein.
       0.646
EEI20748.1
Glycosyl hydrolase family 25; Pfam: PF01183; InterPro: IPR013781.
    
   0.587
EEI18411.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166; Pfam: PF00496; InterPro: IPR000914.
       0.463
EEI18410.1
Putative o-succinylbenzoate synthase; COG: COG4948; Pfam: PF02746,PF01188; InterPro: IPR001354.
       0.449
EEI18712.1
Putative ACR, COG1399; COG: COG1399; Pfam: PF02620; InterPro: IPR003772.
  
    0.431
mscL
Putative large conductance mechanosensitive channel protein; Pfam: PF01741; InterPro: IPR001185.
       0.425
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.