STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI18484.1Hypothetical protein; COG: COG1660; Pfam: PF03668; InterPro: IPR005337. (295 aa)    
Predicted Functional Partners:
EEI18483.1
Hypothetical protein; COG: COG0391; Pfam: PF01933; InterPro: IPR010119.
  
  
 0.968
EEI18482.1
Hypothetical protein; COG: COG1481; Pfam: PF02650; InterPro: IPR003802.
 
  
 0.917
uvrA
Excinuclease ABC, A subunit; COG: COG0178; Pfam: PF00005; InterPro: IPR004602.
     
 0.741
uvrB
Excinuclease ABC, B subunit; COG: COG0556; Pfam: PF04851,PF00271,PF02151; InterPro: IPR004807.
     
 0.735
glmM
Phosphoglucosamine mutase; COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR006352.
 
   
 0.685
raiA
Ribosomal subunit interface protein; COG: COG1544; Pfam: PF02482; InterPro: IPR003489.
 
  
 0.575
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; COG: COG1207; Pfam: PF00483,PF00132; InterPro: IPR005882.
 
  
 0.526
pyk
Pyruvate kinase; COG: COG0469; Pfam: PF00224,PF02887,PF00391; InterPro: IPR001697.
 
     0.518
pts1BCA
Phosphotransferase system, EIIC; COG: COG1263; Pfam: PF02378; InterPro: IPR003352.
      
 0.437
EEI18805.1
PhoH family protein; COG: COG1702; Pfam: PF02562; InterPro: IPR003714.
  
     0.409
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.