STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI18221.1Chloride transporter, ClC family; COG: COG0038; Pfam: PF00654,PF02080; InterPro: IPR014743. (522 aa)    
Predicted Functional Partners:
ntpJ
Putative ATP synthase F0, A subunit; COG: COG0168; Pfam: PF02386; InterPro: IPR004772.
  
 
 0.859
cinA
Competence/damage-inducible domain protein CinA; COG: COG1546; Pfam: PF02464; InterPro: IPR008136.
    
 0.817
EEI18220.1
Transporter, CPA2 family; COG: COG0475; Pfam: PF00999; InterPro: IPR006153.
     
 0.590
sun
Ribosomal RNA small subunit methyltransferase B; COG: COG0144; Pfam: PF01029,PF01189; InterPro: IPR004573.
  
   0.580
napA2
TrkA C-terminal domain protein; Pfam: PF00999,PF02080; InterPro: IPR006153.
     
 0.454
EEI18606.1
Chloride transporter, ClC family; COG: COG0038; Pfam: PF00654; InterPro: IPR014743.
  
     0.449
EEI20245.1
DEAD/DEAH box helicase; COG: COG0514; Pfam: PF00270,PF00271; InterPro: IPR004589.
  
  
 0.448
EEI18347.1
Hypothetical protein; COG: COG2898; Pfam: PF04329,PF04330,PF04331; InterPro: IPR007424.
       0.446
Your Current Organism:
Lactobacillus buchneri ATCC 11577
NCBI taxonomy Id: 525318
Other names: L. buchneri ATCC 11577, Lactobacillus buchneri str. ATCC 11577, Lactobacillus buchneri strain ATCC 11577
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.