STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (344 aa)    
Predicted Functional Partners:
mvaD
Diphosphomevalonate decarboxylase; COG: COG3407.
 
  
 0.996
EEJ73067.1
Phosphomevalonate kinase; COG: COG1577.
 
 0.996
mvk
Mevalonate kinase; COG: COG1577.
 
 
 0.965
EEJ72301.1
Polyprenyl synthetase; COG: COG0142; Belongs to the FPP/GGPP synthase family.
  
 
 0.951
pyk
Pyruvate kinase; COG: COG0469; Belongs to the pyruvate kinase family.
  
 
 0.913
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.899
hmcS
hydroxymethylglutaryl-CoA synthase; COG: COG3425.
 
 
 0.873
mvaA
hydroxymethylglutaryl-CoA reductase, degradative; COG: COG1257; Belongs to the HMG-CoA reductase family.
   
 0.836
EEJ72688.1
Polyprenyl synthetase; COG: COG0142; Belongs to the FPP/GGPP synthase family.
  
 
 0.721
lctP
Transporter, lactate permease (LctP) family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.622
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.