STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbdH1Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028. (264 aa)    
Predicted Functional Partners:
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.980
EEJ72818.1
Putative [acyl-carrier-protein] S-malonyltransferase; COG: COG0331.
 
 0.959
fabZ1
FabA-like domain protein; COG: COG0764.
  
 0.958
EEJ72702.1
Hypothetical protein; COG: COG0331; 2.3.1.39.
 
 0.956
EEJ72663.1
Isochorismatase family protein; COG: COG1335.
  
 0.943
EEJ72461.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
  
 
0.940
fabI
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG0623.
  
 
 0.936
EEJ72814.1
Putative beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; COG: COG0764.
  
 0.934
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.931
fabHA
Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.926
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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