STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ73110.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
EEJ73112.1
Acetyltransferase, GNAT family.
 
     0.778
EEJ73111.1
Hypothetical protein.
       0.773
EEJ72251.1
Hypothetical protein.
  
     0.525
EEJ72636.1
Antibiotic biosynthesis monooxygenase.
 
   
 0.507
citX
holo-ACP synthase CitX; COG: COG3697.
       0.484
EEJ73077.1
Hypothetical protein.
  
     0.482
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
     
 0.471
arcA
Arginine deiminase; COG: COG2235.
     
 0.470
arcC
Carbamate kinase; COG: COG0549; Belongs to the carbamate kinase family.
       0.469
EEJ71207.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.