STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72897.1Transporter, major facilitator family protein. (390 aa)    
Predicted Functional Partners:
EEJ70958.1
Histidine kinase; COG: COG4585.
    
  0.618
EEJ71946.1
Oxidoreductase, 2-nitropropane dioxygenase family protein; COG: COG2070.
  
 
  0.610
EEJ72947.1
DNA-binding helix-turn-helix protein.
  
    0.573
EEJ71679.1
ABC transporter, ATP-binding protein.
  
  
 0.555
EEJ72895.1
Hypothetical protein.
       0.492
EEJ72896.1
Hypothetical protein.
       0.492
EEJ73128.1
Transporter, major facilitator family protein.
 
 
 0.470
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.467
EEJ72898.1
Hypothetical protein.
       0.441
EEJ72439.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.