STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZBeta-galactosidase trimerization domain protein; COG: COG1874. (669 aa)    
Predicted Functional Partners:
lacM
Beta galactosidase small chain.
  
 0.986
lacL
Glycosyl hydrolase family 2, TIM barrel domain protein; COG: COG3250.
  
 0.976
galM
Aldose 1-epimerase; COG: COG2017.
  
 
 0.968
gph
Glycoside/pentoside/hexuronide transporter; COG: COG2190.
 
  
 0.939
EEJ71417.1
Hypothetical protein.
  
 
 0.884
EEJ72847.1
Alpha-galactosidase; COG: COG3345.
 
  
 0.782
agaR2
Alpha-galactosidase; COG: COG3345.
    
 0.752
EEJ72846.1
Hypothetical protein; COG: COG3345; 3.2.1.22.
    
 0.752
agaR1
Alpha-galactosidase; COG: COG3345.
    
 0.752
agaR3
Alpha-galactosidase; COG: COG3345.
    
 0.752
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.