STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnAGlutamine synthetase, type I; COG: COG0174. (445 aa)    
Predicted Functional Partners:
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.978
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.954
arcC
Carbamate kinase; COG: COG0549; Belongs to the carbamate kinase family.
     
 0.947
EEJ73046.1
Putative carbamoyl-phosphate synthase, small subunit; COG: COG0505.
  
 
 0.915
carA
Carbamoyl-phosphate synthase, small subunit; COG: COG0505; Belongs to the CarA family.
  
 
 0.915
EEJ71898.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG1249.
  
 
 0.914
EEJ71903.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG1249.
  
 
 0.914
EEJ73045.1
Putative carbamoyl-phosphate synthase, large subunit; COG: COG0458; Belongs to the CarB family.
  
 
 0.912
carB
Carbamoyl-phosphate synthase, large subunit; COG: COG0458; Belongs to the CarB family.
  
 
 0.912
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.893
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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