STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72866.1Bacterial membrane protein YfhO. (862 aa)    
Predicted Functional Partners:
EEJ72865.1
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768.
       0.692
EEJ71696.1
Hypothetical protein.
  
     0.661
EEJ72227.1
Hypothetical protein.
 
     0.578
EEJ72943.1
Glycosyltransferase, group 2 family protein; COG: COG0463.
 
  
 0.573
EEJ72625.1
Glycosyltransferase, group 2 family protein; COG: COG0463.
 
  
 0.570
plcR
Transcriptional regulator, Cro/CI family.
  
     0.533
EEJ72867.1
BadF/BadG/BcrA/BcrD ATPase family protein; COG: COG2971.
       0.515
EEJ72880.1
Putative ACR, COG1399; COG: COG1399.
 
     0.511
EEJ71579.1
Cell envelope-like function transcriptional attenuator common domain protein; COG: COG1316.
 
    0.460
EEJ73085.1
Peptidase, M23 family.
  
     0.455
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.