STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lisRResponse regulator receiver domain protein; COG: COG0745. (238 aa)    
Predicted Functional Partners:
lisK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642.
 0.998
yclK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642.
 0.969
EEJ72806.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642.
 0.968
EEJ71631.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642.
 0.952
walK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG5002.
 0.937
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.899
pyk
Pyruvate kinase; COG: COG0469; Belongs to the pyruvate kinase family.
    
 0.896
EEJ72233.1
Transcriptional regulator, AraC family.
  
 
 0.613
EEJ70957.1
Response regulator receiver domain protein; COG: COG2197.
 
 0.613
EEJ72880.1
Putative ACR, COG1399; COG: COG1399.
  
    0.591
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.