STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcAMalonate decarboxylase, alpha subunit. (552 aa)    
Predicted Functional Partners:
mdcD
Malonate decarboxylase, beta subunit; COG: COG0777.
 
 0.993
citG
triphosphoribosyl-dephospho-CoA synthase CitG; COG: COG1767.
  
 0.980
mdcC
Malonate decarboxylase acyl carrier, delta subunit.
 
  
 0.969
EEJ72702.1
Hypothetical protein; COG: COG0331; 2.3.1.39.
 
  
 0.963
mdcG
Malonate decarboxylase holo-[acyl-carrier-protein] synthase.
 
  
 0.962
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.931
accD
Putative acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.894
EEJ72697.1
Hydrolase, alpha/beta domain protein; COG: COG0596.
 
 
  0.850
EEJ72703.1
Transcriptional regulator, LysR family; COG: COG0583; Belongs to the LysR transcriptional regulatory family.
 
     0.790
thil
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.702
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.