STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72704.1Hypothetical protein. (369 aa)    
Predicted Functional Partners:
EEJ72703.1
Transcriptional regulator, LysR family; COG: COG0583; Belongs to the LysR transcriptional regulatory family.
 
     0.784
mdcG
Malonate decarboxylase holo-[acyl-carrier-protein] synthase.
 
     0.709
EEJ72702.1
Hypothetical protein; COG: COG0331; 2.3.1.39.
 
     0.697
mdcD
Malonate decarboxylase, beta subunit; COG: COG0777.
 
     0.696
mdcC
Malonate decarboxylase acyl carrier, delta subunit.
 
     0.644
EEJ72697.1
Hydrolase, alpha/beta domain protein; COG: COG0596.
 
     0.579
mdcA
Malonate decarboxylase, alpha subunit.
 
     0.578
citG
triphosphoribosyl-dephospho-CoA synthase CitG; COG: COG1767.
 
     0.500
EEJ72118.1
Acyltransferase; COG: COG1835.
      
 0.465
EEJ71284.1
Amino acid ABC transporter, permease protein.
  
     0.441
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.