STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72662.1Transcriptional regulator, IclR family, C-terminal domain protein. (246 aa)    
Predicted Functional Partners:
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.897
EEJ72664.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
  
 0.807
EEJ72663.1
Isochorismatase family protein; COG: COG1335.
       0.795
EEJ72657.1
Hypothetical protein.
 
  
 0.675
thil
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.616
EEJ72660.1
DEAD/DEAH box helicase; COG: COG1201.
   
   0.568
EEJ72667.1
Hypothetical protein.
    
 0.509
accC
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.494
pta
Phosphate acetyltransferase; COG: COG0280.
    
 0.483
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.471
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.