STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72665.1Nitroreductase family protein; COG: COG0778; Belongs to the flavin oxidoreductase frp family. (252 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein RibF; COG: COG0196; Belongs to the ribF family.
    
 0.940
EEJ71842.1
Cof-like hydrolase; COG: COG0561.
    
  0.919
EEJ73069.1
Cof-like hydrolase; COG: COG0561.
    
  0.906
azr
Flavin reductase; COG: COG0431.
    
 0.897
nqr
Flavin reductase; COG: COG0431.
  
 
 0.871
EEJ72493.1
Cof-like hydrolase; COG: COG0561.
    
  0.866
EEJ72073.1
Nitroreductase family protein; COG: COG0778.
     
 0.672
birA1
biotin--[acetyl-CoA-carboxylase] ligase; COG: COG0340.
  
    0.643
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.604
EEJ71857.1
ABC-2 type transporter.
  
  
 0.597
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.