STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72560.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
hbdH1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
   
 
 0.768
EEJ72817.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; COG: COG1028.
   
 
 0.768
EEJ72664.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
   
 
 0.768
EEJ72461.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
   
 
 0.768
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.764
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.762
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.756
EEJ71837.1
Helicase C-terminal domain protein; COG: COG1061.
    
   0.720
EEJ71245.1
Helicase C-terminal domain protein; COG: COG1061.
    
   0.720
EEJ73061.1
Hypothetical protein; COG: COG1199.
    
   0.691
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.