STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72480.1Putative ATP synthase F0, A subunit. (464 aa)    
Predicted Functional Partners:
EEJ72936.1
DNA-binding helix-turn-helix protein.
  
     0.722
EEJ72337.1
ABC transporter, ATP-binding protein.
  
 
 0.646
EEJ72709.1
Hydrolase, NUDIX family.
 
    0.642
EEJ73034.1
Hypothetical protein.
  
   
 0.560
EEJ71183.1
Hypothetical protein.
  
     0.554
EEJ71269.1
Putative bacteriocin helveticin-J.
  
     0.523
EEJ72338.1
ABC transporter, ATP-binding protein.
  
 
 0.481
nrdF
Ribonucleoside-diphosphate reductase, beta subunit; COG: COG0208.
  
 
  0.475
EEJ73033.1
ABC transporter, ATP-binding protein; COG: COG1131.
  
   
 0.438
EEJ71796.1
Hypothetical protein; Belongs to the UPF0255 family.
  
     0.428
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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