STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72458.1FtsK/SpoIIIE family protein; COG: COG1674; Belongs to the FtsK/SpoIIIE/SftA family. (811 aa)    
Predicted Functional Partners:
EEJ72459.1
Peptidase M16 inactive domain protein.
  
    0.849
EEJ72460.1
Peptidase, M16 family; COG: COG0612.
  
    0.846
EEJ72461.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
  
 0.846
EEJ72456.1
Putative RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.802
ftsQ
POTRA domain protein, FtsQ-type; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
 
 0.794
EEJ72457.1
Hypothetical protein.
       0.765
EEJ72723.1
Hypothetical protein.
  
 
 0.762
EEJ72151.1
Hypothetical protein.
  
 
 0.762
EEJ71446.1
Hypothetical protein.
  
 
 0.762
EEJ71623.1
ParB-like protein; COG: COG1475; Belongs to the ParB family.
 
  
 0.745
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.