STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72348.1Prepilin-type cleavage/methylation N-terminal domain protein. (142 aa)    
Predicted Functional Partners:
EEJ72345.1
Type II/IV secretion system protein; COG: COG2804.
  
 0.989
EEJ72347.1
Prepilin-type cleavage/methylation N-terminal domain protein.
  
 
 0.987
EEJ72346.1
Bacterial type II secretion system domain protein F.
  
  
 0.972
EEJ72350.1
Hypothetical protein.
  
  
 0.955
EEJ72205.1
DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333.
  
  
 0.817
EEJ72349.1
Hypothetical protein.
       0.773
EEJ72468.1
Helicase C-terminal domain protein; COG: COG4098.
   
  
 0.714
EEJ71095.1
Hypothetical protein.
  
  
 0.636
EEJ72204.1
comEA protein; COG: COG1555.
  
  
 0.619
dprA
DNA protecting protein DprA; COG: COG0758.
  
  
 0.614
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.