Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEJ70939.1 | EEJ72189.1 | HMPREF0548_2202 | HMPREF0548_0876 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.697 |
EEJ70939.1 | EEJ73072.1 | HMPREF0548_2202 | HMPREF0548_0053 | Hypothetical protein. | Hypothetical protein. | 0.765 |
EEJ70939.1 | murE | HMPREF0548_2202 | HMPREF0548_1533 | Hypothetical protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.428 |
EEJ70939.1 | pepN | HMPREF0548_2202 | HMPREF0548_1494 | Hypothetical protein. | Membrane alanyl aminopeptidase; COG: COG0308. | 0.719 |
EEJ70939.1 | pepX | HMPREF0548_2202 | HMPREF0548_0798 | Hypothetical protein. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.748 |
EEJ71471.1 | EEJ72294.1 | HMPREF0548_1670 | HMPREF0548_0816 | Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | Creatinase; COG: COG0006. | 0.718 |
EEJ71471.1 | pepI | HMPREF0548_1670 | HMPREF0548_1813 | Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | 0.953 |
EEJ71471.1 | pepN | HMPREF0548_1670 | HMPREF0548_1494 | Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | Membrane alanyl aminopeptidase; COG: COG0308. | 0.797 |
EEJ71471.1 | pepX | HMPREF0548_1670 | HMPREF0548_0798 | Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.850 |
EEJ72189.1 | EEJ70939.1 | HMPREF0548_0876 | HMPREF0548_2202 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.697 |
EEJ72189.1 | EEJ73072.1 | HMPREF0548_0876 | HMPREF0548_0053 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.735 |
EEJ72189.1 | pepX | HMPREF0548_0876 | HMPREF0548_0798 | Tetratricopeptide repeat protein. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.651 |
EEJ72294.1 | EEJ71471.1 | HMPREF0548_0816 | HMPREF0548_1670 | Creatinase; COG: COG0006. | Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | 0.718 |
EEJ72294.1 | pepI | HMPREF0548_0816 | HMPREF0548_1813 | Creatinase; COG: COG0006. | Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. | 0.658 |
EEJ72294.1 | pepN | HMPREF0548_0816 | HMPREF0548_1494 | Creatinase; COG: COG0006. | Membrane alanyl aminopeptidase; COG: COG0308. | 0.730 |
EEJ72294.1 | pepX | HMPREF0548_0816 | HMPREF0548_0798 | Creatinase; COG: COG0006. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.710 |
EEJ73072.1 | EEJ70939.1 | HMPREF0548_0053 | HMPREF0548_2202 | Hypothetical protein. | Hypothetical protein. | 0.765 |
EEJ73072.1 | EEJ72189.1 | HMPREF0548_0053 | HMPREF0548_0876 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.735 |
EEJ73072.1 | murE | HMPREF0548_0053 | HMPREF0548_1533 | Hypothetical protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.520 |
EEJ73072.1 | pepN | HMPREF0548_0053 | HMPREF0548_1494 | Hypothetical protein. | Membrane alanyl aminopeptidase; COG: COG0308. | 0.446 |
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