STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72204.1comEA protein; COG: COG1555. (228 aa)    
Predicted Functional Partners:
EEJ72205.1
DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333.
 
  
 0.957
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
      0.900
EEJ72203.1
Hypothetical protein; COG: COG3480.
      0.863
holA
DNA polymerase III, delta subunit; COG: COG1466.
     
 0.847
EEJ72468.1
Helicase C-terminal domain protein; COG: COG4098.
   
  
 0.833
EEJ72345.1
Type II/IV secretion system protein; COG: COG2804.
 
  
 0.768
ftsW
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Belongs to the SEDS family.
  
  
 0.746
EEJ72346.1
Bacterial type II secretion system domain protein F.
  
  
 0.740
rsmD
RNA methyltransferase, RsmD family; COG: COG0742.
       0.702
EEJ71095.1
Hypothetical protein.
   
  
 0.669
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.