Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEJ72114.1 | EEJ72115.1 | HMPREF0548_0991 | HMPREF0548_0992 | Amino acid permease; COG: COG0531. | SNARE-like domain protein; COG: COG0586. | 0.520 |
| EEJ72115.1 | EEJ72114.1 | HMPREF0548_0992 | HMPREF0548_0991 | SNARE-like domain protein; COG: COG0586. | Amino acid permease; COG: COG0531. | 0.520 |
| EEJ72115.1 | cgtA | HMPREF0548_0992 | HMPREF0548_0994 | SNARE-like domain protein; COG: COG0586. | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.427 |
| EEJ72115.1 | thiN | HMPREF0548_0992 | HMPREF0548_0837 | SNARE-like domain protein; COG: COG0586. | Thiamine diphosphokinase; COG: COG1564. | 0.439 |
| EEJ72115.1 | uvrC | HMPREF0548_0992 | HMPREF0548_0993 | SNARE-like domain protein; COG: COG0586. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.530 |
| cgtA | EEJ72115.1 | HMPREF0548_0994 | HMPREF0548_0992 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | SNARE-like domain protein; COG: COG0586. | 0.427 |
| cgtA | uvrC | HMPREF0548_0994 | HMPREF0548_0993 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.698 |
| thiN | EEJ72115.1 | HMPREF0548_0837 | HMPREF0548_0992 | Thiamine diphosphokinase; COG: COG1564. | SNARE-like domain protein; COG: COG0586. | 0.439 |
| uvrC | EEJ72115.1 | HMPREF0548_0993 | HMPREF0548_0992 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | SNARE-like domain protein; COG: COG0586. | 0.530 |
| uvrC | cgtA | HMPREF0548_0993 | HMPREF0548_0994 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.698 |