STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72086.1ErfK/YbiS/YcfS/YnhG. (401 aa)    
Predicted Functional Partners:
EEJ72085.1
Hypothetical protein.
 
     0.645
EEJ71730.1
Hypothetical protein.
 
     0.629
EEJ72084.1
Phosphomethylpyrimidine kinase; COG: COG2240.
       0.556
EEJ71480.1
Matrixin.
  
     0.543
EEJ71640.1
Hypothetical protein.
  
  
 0.491
EEJ72087.1
Hypothetical protein.
       0.466
EEJ72630.1
Hypothetical protein.
  
  
 0.460
EEJ72083.1
Hypothetical protein.
       0.423
EEJ72894.1
Hypothetical protein.
  
     0.414
rpsA
Putative ribosomal protein S1; COG: COG0539.
  
     0.403
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.