STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glvRTranscriptional regulator, RpiR family; COG: COG1737. (256 aa)    
Predicted Functional Partners:
bglP2
PTS system, beta-glucoside-specific, IIABC component; COG: COG1263.
 
 
 0.955
treB
Phosphotransferase system, EIIC; COG: COG1263.
  
 
 0.948
scrA
PTS system sucrose-specific IIBC component; COG: COG1263.
  
 
 0.948
glvC
PTS system maltose-specific EIICB component; COG: COG1263.
 
 
 0.892
aglB
6-phospho-alpha-glucosidase; COG: COG1486.
 
 
 0.838
EEJ72079.1
PTS system, lactose/cellobiose family IIC component; COG: COG1455.
 
   
 0.782
sacP
Phosphotransferase system, EIIC; COG: COG1263.
  
 
 0.736
EEJ72035.1
Hypothetical protein; 3.1.3.48.
 
     0.598
EEJ71266.1
Toxin-antitoxin system, antitoxin component, Xre family.
  
     0.580
EEJ72078.1
Hypothetical protein.
       0.572
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.