STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71917.1Semialdehyde dehydrogenase, NAD binding domain protein; COG: COG2910. (215 aa)    
Predicted Functional Partners:
EEJ71732.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
    0.577
arcA
Arginine deiminase; COG: COG2235.
   
    0.573
EEJ71918.1
Hypothetical protein.
       0.538
EEJ71196.1
Acetyltransferase, GNAT family.
   
    0.515
EEJ71045.1
Zinc-binding alcohol dehydrogenase family protein; COG: COG0604; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
    0.507
EEJ71046.1
Hypothetical protein.
  
    0.507
EEJ71642.1
Putative Di-/tripeptide transporter; COG: COG3104.
   
    0.502
EEJ71643.1
Hypothetical protein; COG: COG3104.
   
    0.502
EEJ71907.1
Transcriptional regulator, Rrf2 family; COG: COG1959.
  
  
 0.460
ppc
Phosphoenolpyruvate carboxykinase (GTP); Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
       0.412
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.