STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71976.1Transcriptional regulator, LysR family; COG: COG0583; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
EEJ71993.1
Transcriptional regulator, LysR family; COG: COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.754
lysR2
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.741
EEJ71978.1
Hypothetical protein; COG: COG1073.
  
    0.549
sdh
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG4221; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.542
EEJ72676.1
Cupin domain protein; COG: COG1917.
 
  
 0.423
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.