STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ72000.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
EEJ70939.1
Hypothetical protein.
  
 
 0.946
EEJ72001.1
Acetyltransferase, GNAT family.
 
  
 0.819
cysK
Cysteine synthase A; COG: COG0031; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.683
EEJ72105.1
Pyridoxamine 5'-phosphate oxidase family protein.
  
 
 0.674
EEJ72002.1
Hypothetical protein.
  
    0.670
EEJ71999.1
Hypothetical protein.
 
  
 0.660
EEJ71313.1
COG: COG1053.
  
 
 0.639
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
  
 
  0.619
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
 0.605
EEJ70973.1
DHH family protein; COG: COG0618.
  
 
  0.603
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.