STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71878.1Cytidine and deoxycytidylate deaminase zinc-binding region. (134 aa)    
Predicted Functional Partners:
tdk
Thymidine kinase; COG: COG1435.
    
 0.974
udk
Uridine kinase; COG: COG0572.
    
 0.974
yfkN
5'-nucleotidase, C-terminal domain protein; COG: COG0737; Belongs to the 5'-nucleotidase family.
    
 0.940
EEJ71776.1
Deoxyguanosine kinase; COG: COG1428.
    
 0.752
dak
Deoxyadenosine kinase; COG: COG1428.
    
 0.752
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 
 0.748
EEJ73125.1
Hypothetical protein.
  
 
 0.746
EEJ73126.1
Hypothetical protein.
  
 
 0.746
EEJ72005.1
Hypothetical protein.
  
 
 0.746
EEJ71879.1
Hypothetical protein; COG: COG2365.
    
  0.743
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.