STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71848.1ABC transporter, ATP-binding protein; COG: COG1136. (230 aa)    
Predicted Functional Partners:
EEJ71849.1
Efflux ABC transporter, permease protein.
 
 
 0.968
EEJ71719.1
Efflux ABC transporter, permease protein; COG: COG0577.
 
 0.955
EEJ71850.1
Efflux ABC transporter, permease protein.
 
 
 0.913
EEJ71182.1
ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.
 
 
   
0.900
EEJ71783.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
0.828
EEJ71209.1
Efflux ABC transporter, permease protein.
 
 0.821
EEJ71610.1
Efflux ABC transporter, permease protein; COG: COG0577.
  
 0.820
EEJ71030.1
Efflux ABC transporter, permease protein.
  
 0.820
EEJ71432.1
ABC transporter, permease protein; COG: COG0765.
 
 
 
  0.723
EEJ71392.1
ABC transporter, permease protein; COG: COG0765.
 
 
 0.703
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.