STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71732.1CsbD-like protein; Belongs to the UPF0337 (CsbD) family. (63 aa)    
Predicted Functional Partners:
EEJ71731.1
Transglycosylase associated protein; COG: COG2261.
 
  
 0.778
EEJ71917.1
Semialdehyde dehydrogenase, NAD binding domain protein; COG: COG2910.
  
    0.577
EEJ72663.1
Isochorismatase family protein; COG: COG1335.
  
    0.574
EEJ71464.1
Peptidase propeptide and YPEB domain protein.
  
     0.508
EEJ71204.1
PTS system fructose IIA component.
   
    0.507
EEJ70961.1
PTS system fructose IIA component.
   
    0.507
EEJ72075.1
Hypothetical protein.
  
     0.498
EEJ71346.1
Hypothetical protein.
  
     0.488
EEJ71406.1
Hypothetical protein.
  
     0.486
EEJ71338.1
Hypothetical protein.
  
    0.481
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.