STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71759.1Transporter, major facilitator family protein. (450 aa)    
Predicted Functional Partners:
EEJ71406.1
Hypothetical protein.
  
     0.622
EEJ72075.1
Hypothetical protein.
  
     0.576
nrdJ
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
  0.508
EEJ71760.1
Hypothetical protein.
  
    0.505
nrdF
Ribonucleoside-diphosphate reductase, beta subunit; COG: COG0208.
   
 
  0.495
tdk
Thymidine kinase; COG: COG1435.
     
 0.477
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.476
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.470
yfkN
5'-nucleotidase, C-terminal domain protein; COG: COG0737; Belongs to the 5'-nucleotidase family.
   
 
  0.403
EEJ70940.1
Ser/Thr phosphatase family protein; COG: COG0737; Belongs to the 5'-nucleotidase family.
   
 
  0.403
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.