STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnAAspartate--ammonia ligase; COG: COG2502. (337 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.937
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.936
ansA
L-asparaginase, type I; COG: COG0252.
     
 0.936
asnB
Asparagine synthase (glutamine-hydrolyzing); COG: COG0367.
   
 
 0.910
asnB-2
Asparagine synthase (glutamine-hydrolyzing); COG: COG0367.
   
 
 0.910
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.670
EEJ73104.1
Homoserine dehydrogenase; COG: COG0460.
   
 
  0.617
EEJ73045.1
Putative carbamoyl-phosphate synthase, large subunit; COG: COG0458; Belongs to the CarB family.
     
 0.519
carB
Carbamoyl-phosphate synthase, large subunit; COG: COG0458; Belongs to the CarB family.
     
 0.519
aspB
Aminotransferase, class I/II; COG: COG0436.
     
 0.439
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.