STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nplTAlpha amylase, catalytic domain protein; COG: COG0366; Belongs to the glycosyl hydrolase 13 family. (577 aa)    
Predicted Functional Partners:
EEJ71683.1
Glycosyl hydrolase family 65 central catalytic domain protein; COG: COG1554.
 
 
 0.976
bglP2
PTS system, beta-glucoside-specific, IIABC component; COG: COG1263.
  
 
 0.959
treB
Phosphotransferase system, EIIC; COG: COG1263.
  
 
 0.959
scrA
PTS system sucrose-specific IIBC component; COG: COG1263.
  
 
 0.959
EEJ71681.1
Alpha amylase, catalytic domain protein; COG: COG0366.
 
 
0.953
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
0.949
glgP
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.928
EEJ71686.1
ABC transporter, solute-binding protein; COG: COG2182.
 
  
 0.903
EEJ71687.1
ABC transporter, permease protein; COG: COG1175.
 
  
 0.835
EEJ71380.1
F5/8 type C domain protein; COG: COG1501; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.830
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.