STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71686.1ABC transporter, solute-binding protein; COG: COG2182. (407 aa)    
Predicted Functional Partners:
EEJ71687.1
ABC transporter, permease protein; COG: COG1175.
 
 0.999
EEJ71688.1
ABC transporter, permease protein; COG: COG3833.
 
 0.999
EEJ71685.1
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
 
 0.991
ugpC2
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
 
 0.981
ugpC1
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
  
 0.979
EEJ71455.1
ABC transporter, ATP-binding protein; COG: COG3839; Belongs to the ABC transporter superfamily.
  
 0.979
EEJ72827.1
ABC transporter, permease protein; COG: COG1175.
  
 0.943
EEJ72843.1
ABC transporter, permease protein; COG: COG1175.
  
 0.943
EEJ71456.1
ABC transporter, permease protein; COG: COG1175.
  
 0.943
nplT
Alpha amylase, catalytic domain protein; COG: COG0366; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.903
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.