STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71631.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642. (384 aa)    
Predicted Functional Partners:
EEJ71630.1
Response regulator receiver domain protein; COG: COG0745.
 0.994
lisR
Response regulator receiver domain protein; COG: COG0745.
 0.952
EEJ71303.1
Response regulator receiver domain protein; COG: COG0745.
 0.952
EEJ72358.1
Response regulator receiver domain protein; COG: COG0745.
 0.950
EEJ72807.1
Response regulator receiver domain protein; COG: COG0745.
 0.925
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.902
pyk
Pyruvate kinase; COG: COG0469; Belongs to the pyruvate kinase family.
    
 0.896
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
  
 0.712
EEJ70957.1
Response regulator receiver domain protein; COG: COG2197.
 0.686
EEJ71633.1
Aspartate racemase; COG: COG1794; Belongs to the aspartate/glutamate racemases family.
       0.676
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.