STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71525.1CAAX amino terminal protease family protein. (399 aa)    
Predicted Functional Partners:
EEJ71526.1
CAAX amino terminal protease family protein.
 
    
0.777
EEJ71475.1
Gram-positive signal peptide protein, YSIRK family.
  
     0.588
EEJ71527.1
Hypothetical protein.
 
     0.532
EEJ71524.1
Hypothetical protein; COG: COG1672.
       0.528
EEJ72251.1
Hypothetical protein.
  
     0.480
EEJ71528.1
Hypothetical protein; COG: COG2972.
 
     0.475
EEJ71538.1
Hypothetical protein.
  
 
  0.453
EEJ71912.1
NmrA family protein; COG: COG0702.
 
     0.442
EEJ71626.1
Hypothetical protein.
 
     0.440
EEJ71002.1
Transporter, auxin efflux carrier (AEC) family protein; COG: COG0679.
  
     0.433
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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