STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71528.1Hypothetical protein; COG: COG2972. (432 aa)    
Predicted Functional Partners:
EEJ71529.1
LytTr DNA-binding domain protein; COG: COG3279.
 
 
 0.991
EEJ71516.1
LytTr DNA-binding domain protein; COG: COG3279.
 
 
 0.966
EEJ70959.1
Hypothetical protein.
  
 
 0.744
EEJ70960.1
Hypothetical protein.
  
 
 0.744
EEJ72233.1
Transcriptional regulator, AraC family.
  
 
 0.660
EEJ72828.1
ABC transporter, solute-binding protein; COG: COG1653.
 
   
 0.636
EEJ71526.1
CAAX amino terminal protease family protein.
 
     0.615
EEJ72939.1
GtrA-like protein.
  
     0.555
EEJ73031.1
LytTr DNA-binding domain protein.
 
 
 0.549
EEJ71527.1
Hypothetical protein.
 
    
0.542
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.