STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71553.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)    
Predicted Functional Partners:
EEJ71552.1
Putative toxin-antitoxin system, toxin component, RelE family.
 
 
 0.957
EEJ71922.1
Putative addiction module toxin, Txe/YoeB family.
  
 
 0.795
EEJ71852.1
Addiction module toxin, Txe/YoeB family.
  
 
 0.795
pepF
Oligoendopeptidase F; COG: COG1164.
       0.570
EEJ71183.1
Hypothetical protein.
 
   
 0.553
EEJ71173.1
Hypothetical protein.
 
   
 0.546
EEJ72936.1
DNA-binding helix-turn-helix protein.
  
     0.487
EEJ72938.1
DNA-binding helix-turn-helix protein.
  
     0.472
EEJ72552.1
Transporter, major facilitator family protein.
  
     0.436
EEJ71556.1
Fic family protein; COG: COG3177.
       0.415
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.