STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71579.1Cell envelope-like function transcriptional attenuator common domain protein; COG: COG1316. (348 aa)    
Predicted Functional Partners:
epsB
Chain length determinant protein.
 
  
 0.941
epsD
PHP domain protein; COG: COG4464.
 
  
 0.824
ywqD
Capsular exopolysaccharide family; COG: COG0489.
 
  
 0.788
epsE
Bacterial sugar transferase; COG: COG2148.
     
 0.586
EEJ71577.1
Hypothetical protein.
 
  
 0.554
EEJ71584.1
Glycosyltransferase, group 1 family protein; COG: COG0438.
     
 0.495
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.480
EEJ72866.1
Bacterial membrane protein YfhO.
 
    0.460
EEJ71576.1
Hypothetical protein.
       0.437
EEJ71585.1
Oligosaccharide biosynthesis protein Alg14 like protein.
     
 0.419
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.